Publication Search Results
Exact matches for:
- Author = Yang YH [web profile page]
101.
Chung SH, Shen W, Jayawardana K, Wang P, Yang YH, Shackel N, Gillies MC
S H Chung, W Shen, K Jayawardana, P Wang, J Yang, N Shackel, M C Gillies:
Differential gene expression profiling after conditional müller-cell ablation in a novel transgenic model,
Investigative Ophthalmology and Visual Science,
54
(2013),
no. 3,
2142–2152.
102.
Oates J, Casikar I, Campain AE, Muller S, Yang YH, Reid S, Condous G
Jennifer Oates, Ishwari Casikar, Anna Campain, Samuel Müller, Jean Yang, Shannon Reid, George Condous:
A prediction model for viability at the end of the first trimester after a single early pregnancy evaluation,
Australian and New Zealand Journal of Obstetrics and Gynaecology,
53
(2013),
51–57.
103.
Yang P, Ma J, Wang P, Zhu Y, Zhou BB, Yang YH
Pengyi Yang, Jie Ma, Penghao Wang, Yunping Zhu, Bing B. Zhou, and Yee Hwa (Jean) Yang:
Improving X!Tandem on Peptide Identification from Mass Spectrometry by Self-Boosted Percolator,
IEEE/ACM Transactions on Computational Biology and Bioinformatics,
9
(2012),
no. 5,
1273–1280.
104.
Wang P, Yang P, Yang YH
P Wang, P Yang and J Y H Yang:
OCAP: An open comprehensive analysis pipeline for iTRAQ,
Bioinformatics,
28
(2012),
no. 10,
1404–1405.
105.
Yang P, Humphrey SJ, Fazakerley DJ, Prior MJ, Yang G, James DE, Yang YH
Yang P, Humphrey SJ, Fazakerley DJ, Prior MJ, Yang G, James DE, Yang JYH:
Re-Fraction: A Machine Learning Approach for Deterministic Identification of Protein Homologues and Splice Variants in Largescale MS-based Proteomics,
Journal of Proteome Research,
11
(2012),
no. 5,
3035–3045.
106.
Schramm SJ, Campain AE, Scolyer RA, Yang YH, Mann GJ
Sarah-Jane Schramm, Anna E Campain, Richard A Scolyer, Yee Hwa Yang and Graham J Mann:
Review and cross-validation of gene expression signatures and melanoma prognosis,
Journal of Investigative Dermatology,
132
(2012),
274–283.
107.
Jayaswal V, Lutherborrow MA, Yang YH
V Jayaswal, M Lutherborrow and Y H Yang:
Measures of association for identifying microRNA-mRNA pairs of biological interest,
PLoS ONE,
7
(2012),
no. 1,
art. no. e29612.
108.
Marques FZ, Campain AE, Tomaszewski M, Zukowska-Szczechowska E, Yang YH, Charchar FJ, Morris BJ
Francine Z Marques, Anna E Campain, Maciej Tomaszewski, Ewa Zukowska-Szczechowska, Yee Hwa J Yang, Fadi J Charchar, Brian J Morris:
Gene expression profiling reveals renin mRNA overexpression in human hypertensive kidneys and a role for microRNAs,
Hypertension,
58
(2011),
1093–1098.
109.
Marques FZ, Campain AE, Davern PJ, Yang YH, Head GA, Morris BJ
Francine Z Marques, Anna E Campain, Pamela J Davern, Yee Hwa J Yang, Geoffrey A Head,and Brian J Morris:
Global identification of the genes and pathways differentially expressed in hypothalamus in early and established neurogenic hypertension,
Physiological Genomics,
43
(2011),
766–771.
110.
Peters T, Bulger DW, Loi TH, Yang YH, Ma C
Tim Peters, David W Bulger,To-Ha Loi, Jean Yee Hwa Yang and David Ma:
Two-step cross -entropy feature selection for microarrays - power through complementarity,
IEEE/ACM Transactions on computational biology and bioinformatics,
8
(2011),
no. 4,
1148–1151.
111.
Yang P, Ho JWK, Yang YH, Zhou BB
Pengyi Yang, Joshua WK Ho, Yee Hwa Yang, Bing B Zhou:
Gene-gene interaction filtering with ensemble of filters,
BMC Bioinformatics,
12, Supp 1
(2011),
no. S10,
10 pages.
112.
Wu JQ, Dwyer DE, Dyer WB, Yang YH, Wang B, Saksena NK
Jing Qin Wu, Dominic E Dwyer, Wayne B Dyer, Yee Hwa Yang, Bin Wang, Nitin K Saksena:
Genome-wide analysis of primary CD4+ and CD8+ T cell transcriptomes shows evidence for a network of enriched pathways associated with HIV disease,
Retrovirology,
8
(2011),
no. 18,
1–21.
113.
Loi TH, Campain AE, Bryant A, Molloy TJ, Lutherborrow MA, Turner J, Yang YH, Ma DDF
To Ha Loi, Anna Campain, Adam Bryant, Tim J Molloy, Mark Lutherborrow, Jennifer Turner, Yee Hwa Jean Yang and David DF Ma:
Discriminating lymphomas and reactive lymphadenopathy in lymph node biopsies by gene expression profiling,
BMC Medical Genomics,
4
(2011),
no. 27,
10.
114.
Marques FZ, Campain AE, Davern PJ, Yang YH, Head GA, Morris BJ
Francine Z Marques, Anna E Campain, Pamela J Davern, Yee Hwa J Yang, Geoffrey A Head, Brian J Morris:
Genes Influencing Circadian Differences in Blood Pressure in Hypertensive Mice,
PLoS ONE,
6
(2011),
no. 4,
9 pages.
115.
Collinson EJ, Wimmer-Kleikamp S, Gerega SK, Yang YH, Parish CR, Dawes IW, Stocker R
Emma J Collinson, Sabine Wimmer-Kleikamp, Sebastien K Gerega, Yee Hwa Yang, Christopher R Parish, Ian W Dawes and Roland Stocker:
The yeast homolog of heme oxygenase-1 affords cellular antioxidant protection via the transcriptional regulation of known antioxidant genes,
The Journal of Biological Chemistry,
286
(2011),
no. 3,
2205–2214.
116.
Jayaswal V, Lutherborrow MA, Ma DDF, Yang YH
Jayaswal V, Lutherborrow M, Ma DD, Yang YH:
Identification of microRNA-mRNA Modules using Microarray Data,
BMC Genomics,
12
(2011),
138.
117.
Lutherborrow MA, Bryant A, Jayaswal V, Agapiou D, Palma CA, Yang YH, Ma DDF
Lutherborrow M, Bryant A, Jayaswal V, Agapiou D, Palma C, Yang YH, Ma DD:
Expression profiling of cytogenetically normal acute myeloid leukemia identifies microRNAs that target genes involved in monocytic differentiation,
American Journal of Hematology,
86
(2011),
no. 1,
2–11.
118.
Jensen SO, Apisiridej S, Kwong SM, Yang YH, Skurray RA, Firth N
Slade O Jensen, Sumalee Apisiridej, Stephen M Kwong, Yee Hwa Yang, Ronald A Skurray, Neville Firth:
Analysis of the prototypical Staphysococcus aureus multiresistance plasmid pSK1,
Plasmid,
64
(2010),
135–142.
119.
Wang P, Yang P, Arthur J, Yang YH
Penghao Wang, Pengyi Yang, Jonathan Arthur and Jean Yee Hwa Yang:
A dynamic wavelet-based algorithm for pre-processing tandem mass spectrometry data,
Bioinformatics,
26
(2010),
no. 18,
2242–2249.
120.
Karim RZ, Gerega SK, Yang YH, Spillane AJ, Carmalt H, Scolyer RA, Lee CS
Rooshdiya Z Karim, Sebastien K Gerega, Y H Yang, Andrew Spillane, Hugh Carmalt, Richard A Scolyer& C Soon Lee:
p16 and pRb immunohistochemical expression increases with increasing tumour grade in mammary phyllodes tumours,
Histopathology,
56
(2010),
868–875.
121.
Campain AE, Yang YH
Anna Campain and Yee Hwa Yang:
Comparison study of microarray meta-analysis,
BMC Bioinformatics,
11
(2010),
no. 48,
1–11.
122.
Marques FZ, Campain AE, Yang YH, Morris BJ
Francine Z Marques, Anna E Campain, Yee Hwa J Yang and Brian J Morris:
Meta-Analysis of genome-wide gene expression differences in onset and maintenance phases of genetic hypertension,
Hypertension,
56
(2010),
no. 2,
319.
MR1669452
123.
Jayaswal V, Lutherborrow MA, Ma DDF, Yang YH
Jayaswal V, Lutherborrow M, Ma DD, Yang YH:
Idntification of microRNAs with regulatory potential using a matched microRNA -mRNA time-course data,
Nucleic Acids Research,
37
(2009),
no. 8,
e60.
124.
Karim RZ, Li W, Sanki A, Colman MH, Yang YH, Thompson JF, Scolyer RA
Karim RZ, Li W, Sanki A, Colman MH, Yang YH, Thompson JF, Scolyer RA:
Reduced p16 and increased cyclin D1 and pRb expression are correlated with progression in cutaneous melanocytic tumors.,
International Journal of Surgical Pathology,
17
(2009),
no. 5,
361–367.
125.
Karim RZ, Gerega SK, Yang YH, Horvath LG, Spillane AJ, Carmalt H, Solyer RA, Lee CS
Karim RZ, Gerega SK, Yang YH, Horvath L, Spillane A, Carmalt H, Scolyer RA, Lee CS:
Proteins from the Wnt pathway are involved in the pathogenesis and progression of mammary phyllodes tumours,
Journal of Clinical Pathology,
62
(2009),
no. 11,
1016–1020.
126.
Karim RZ, Gerega SK, Yang YH, Spillane AJ, Carmalt H, Scolyer RA, Lee CS
Karim RZ, Gerega SK, Yang YH, Spillane A, Carmalt H, Scolyer RA, Lee CS:
Phyllodes tumours of the breast: a clinicopathological analysis of 65 cases from a single institution.,
Breast,
18
(2009),
no. 3,
165–170.
127.
Wu JQ, Dwyer DE, Dyer WB, Yang YH, Wang B, Saksena NK
Wu JQ, Dwyer DE, Dyer WB, Yang YH, Wang B, Saksena NK:
Transcriptional profiles in CD8+T cells from HIV plus progressors on HAART are characterized by coordinated up-regulation of oxidative phosphorylation enzymes and interferon responses,
Virology,
380
(2008),
no. 1,
124–135.
128.
Kechris K, Yang YH, Yeh RF
Kechris K, Yang YH, Yeh RF:
perdiction of alternatively skipped exons and splicing enhancers from exon junction arrays,
BMC Genomics,
9
(2008),
551.
129.
Lewis CC, Yang YH, Huang X, Banerjee SK, Blackburn MR, Baluk P, McDonald DM, Blackwell TS, Nagabhushanam V, Peters W, Voehringer D, Erle DJ
Lewis CC, Yang JY, Huang X, Banerjee SK, Blackburn MR, Baluk P, McDonald DM, Blackwell TS, Nagabhushanam V, Peters W, Voehringer D, Erle DJ.:
Disease-specific gene expression profiling in multiple models of lung disease.,
American journal of respiratory and critical care medicine,
177
(2008),
no. 4,
376–387.
130.
Yang YH
Jean Yee Hwa Yang:
Microarrays - Planning your experiment,
Clinical Bioinformatics,
Methods in Molecular Medicine,
Humana Press,
NJ USA,
(2007),
71–85.
ISBN 978-1-58829-791-4.
131.
Woodruff PG, Boushey HA, Dolganov GM, Barker CS, Yang YH
Woodruff P.G., Boushey H.A., Dolganov G.M, Barker C.S., Yang Y.H.,:
Genome-wide profiling identifies epithelial cell genes associated with asthma and with treatment response to corticosteroids,
PNAS,
104
(2007),
no. 40,
15858–15863.
132.
Williams E, Xiao YY, Sickles H, Shafer P, Yona G, Yang YH, Lin F
E Williams, Y Xiao, H Sickles, P Shafer, G Yona, J Yang, D Lin:
Novel subdomains of the mouse olfactory bulb defined by molecular heterogeneity in the nascent external plexiform and glomerular,
BMC Development Biology,
7
(2007),
no. 48,
1.
133.
Xiao YY, Segal MR, Yang YH, Yeh RF
Xiao, Y.Y., Segal, M., Yang, Y.H. and Yeh, R. F.:
A multi-array multi-SNP genotyping algorithm for Affymetrix SNP microarray.,
Bioinformatics,
23
(2007),
no. 12,
1459–1467.
134.
Winn VD, Haimov-Kochman R, Paquet AC, Yang YH, Madhusudhan MS, Gormley M, Feng KT, Bernlohr DA, McDonagh S, Pereira L, Sali A, Fisher SJ
Winn, V.D., Haimov-Kochman, R., Paquet, A.C., Yang, Y.J., Madhusudhan, M.S.,Gormley, M., Feng, K.T., Bernlohr, D.A., McDonagh, S., Pereira, L., Sali, A. and Fisher,S.J.:
Gene expression profiling of the human maternal-fetal interface reveals dramatic changes between midgestation and term.,
Endocrinology,
148
(2007),
no. 3,
1059–79.
135.
Woodruff PG, Koth LL, Yang YH, Rodriguez MW, Favoreto S, Dolganov GM, Paquet AC, Erle DJ
Woodruff, P.G., Koth, L.L., Yang, Y.H., Rodriguez, M.W., Favoreto, S., Dolganov,G.M., Paquet, A.C. and Erle, D.J.:
A distinctive alveolar macrophage activation state induced by cigarette smoking,
Am J Respir Crit Care Med,,
172
(2005),
1383–1392.
136.
Xiao YY, Yang YH, Burckin TA, Shiue L, Hartzog GA, Segal MR
Xiao, Y., Yang, Y. H., Burckin, T.A., Shiue, L., Hartzog, G.A., Segal, M.R..:
analysis of a Splice Array Experiment Elucidates Roles of Chromatin Elongation Factor Spt4-5 in Splicing,
PLoS Comput Biol.,
1
(2005),
no. 4,
e39.
137.
Kuperman DA, Lewis CC, Woodruff PG, Rodriguez MW, Yang YH, Dolganov GM, Fahy JV, Erle DJ
Kuperman, D.A., Lewis, C.C.,Woodruff, P.G., Rodriguez, M.W., Yang, Y.H., Dolganov,G.M., Fahy, J.V., Erle, D.J..:
Dissecting asthma using focused transgenic modeling and functional genomics.,
J Allergy Clin Immunol.,
116
(2005),
no. 2,
305–311.
138.
Barker CS, Griffin C, Dolganov GM, Hanspers K, Yang YH, Erle DJ
Barker, C., Griffin, C. Dolganov, G., Hanspers, K., Yang, J.and Erle, D.J.:
Increase DNA hybridization specificity using sscDNA targets.,
BMC Genomics,
6
(2005),
no. 1,
57.
139.
Xiao YY, Segal MR, Yang YH
Xiao, Y. Y., Segal, M. and Yang, Y. H.:
Stepwise Normalization of Two-Channel Spotted Microarrays.,
Statistical Applications in Genetics and Molecular Biolog,,
4
(2005),
Article 4.
140.
Gonzalez R, Yang YH, Griffin C, Allen L, Tigue Z, Dobbs L
Gonzalez, R., Yang, Y. H., Griffin, C., Allen, L., Tigue, Z. and Dobbs, L.:
Freshly isolated Rat Alveolar Type I Cells, Type II Cells, and Cultured Type II Cells Have Distinct Molecular Phenotypes.,
Am J Physiol Lung Cell Mol Physiol.,
288
(2005),
no. 1,
L179–89.
141.
Yang YH, Xiao YY, Segal MR
Yang, Y. H., Xiao, Y. Y. and Segal, M.:
Identifying differentially expressed genes from microarray experiments via statistic synthesis.,
Bioinformatics,
21
(2005),
1084–1093.
142.
Lin DM, Yang YH, Scolnick J, Brunet L, Marsh M, Peng V, Okazaki Y
Lin D, Yang Y. H., Scolnick J., Brunet L., Marsh M., Peng V., Okazaki Y.,:
Spatial patterns of gene expression in the olfactory bulb.,
PNAS,,
101
(2004),
no. 34,
12718–12723.
143.
Rodriguez MW, Paquet AC, Yang YH, Erle DJ
Rodriguez, M.W., Paquet, A.C., Yang, Y. H. and Erle, D.J.:
Differential gene expression by integrin beta7+and beta7-memory T helper cells.,
BMC Immunology,
NA
(2004),
5–13.
144.
Yang YH, Speed TP
Yang, Y. H. and Speed, T. P.:
Design and Analysis of Comparative Microarray Experiments,
Statistical Analysis of Gene Expression Microarray Data,,
Chapman & Hall.,
New York,
(2003),
35–92.
ISBN 1-58488-327-8.
145.
Erle DJ, Yang YH
Erle, D.J. and Yang, Y. H.:
Asthma investigators begin to reap the fruits of genomics.,
Genome Biology,,
4
(2003),
no. 11,
232.
MR2311406
146.
Diaz E, Yang YH, Loh KC, Tessier-Lavigne M, Speed TP, Ngai J
Diaz, E., Yang, Y. H., Loh, K. C., Tessier-Lavigne, M., Speed, T. P. and Ngai, J.:
Molecular analysis of positional identity in the developing mouse retina.,
PNAS,
100
(2003),
no. 9,
5491–5496.
147.
Ball CA, Chen Y, Panavally S, Sherlock G, Speed TP, Spellman PT, Yang YH
C.A. Ball, Y. Chen, S. Panavally, G. Sherlock, T. Speed, P.T. Spellman, Y.H. Yang:
Section7: An introduction to microarray bioinformatics.,
DNA Microarrays: A Molecular Cloning Manual.,
Cold Spring Harbor Press,
Cold Spring Harbor, New York,
(2002),
509–602.
ISBN 0-87969-625-7.
148.
Diaz E, Ge Y, Yang YH, Loh KC, Serafini TA, Okazaki Y, Hayashizaki Y, Speed TP, Ngai J, Scheiffele P
Diaz, E., Ge, Y., Yang, Y. H., Loh, K.C., Serafini, T.A., Okazaki, Y., Hayashizaki, Y.,Speed. T.P., Ngai, J., and Scheiffele, P.:
Molecular Analysis of Gene Expression in the Developing Pontocerebellar Projection System.,
Neuron,
36
(2002),
no. 3,
417–434.
149.
Yang YH, Speed TP
Yang, Y. H. and Speed, T. P.:
Design issues for cDNA microarray experiments.,
Nature Review Genetics,
3
(2002),
579–558.
150.
Speed TP, Yang YH
Speed, T. P. and Yang, Y. H.:
Direct versus indirect designs for cDNA microarray experiments.,
Sankhya Series A,,
64
(2002),
no. Series A, Pt 3,
706–720.
| Number of matches: 154 (showing page 3 of 4) | Select page: 1 2 3 4 |